Hostels in Nagasaki Prefecture, Japan

Hostels in Nagasaki Prefecture, Japan

Enter your dates for the latest hotel rates and availability.

Scroll down to see hotels
Filter by:
Hotel Star Rating
≤2345
Guest Rating
Amazing 9+Great 8+Good 7+Pleasant 6+

Top Hostels - Nagasaki Prefecture

Choose your travel dates to see the latest prices
Most Booked
Lowest price
Closest to downtown
Highest Rated
99+
Hotels in Nagasaki Prefecture
With a stay at Casa Blanca Guesthouse - Hostel, you'll be centrally located in Nagasaki, steps from Hamanomachi Arcade and within a 5-minute walk of Shianbashi Alley. This hostel is 0.2 mi (0.3 km) from Nagasaki Dejima and 0.4 mi (0.7 km) from Nagasaki Prefectural Art Museum. Make use of convenient amenities, which include complimentary wireless internet access and a communal living room. A complimentary continental breakfast is served daily from 6:00 AM to 10:00 AM. Featured amenities include express check-out, multilingual staff, and luggage storage. Make yourself at home in one of the 10 air-conditioned rooms featuring microwaves. Rooms have private balconies. Prepare your meals in the shared/communal kitchen. Complimentary wireless internet access is available to keep you connected. Bathrooms feature showers, complimentary toiletries, and bidets.

"The hostel is nice with a nice layout that gives you some privacy. However since every bed has its own light people just kept it on the whole night so I couldn’t sleep. Also the dormitory is small and showers and toilets are inside the room and people started to use the hairdryer early in the morning. The owners are nice tho, and when I complaint they gave me an eye mask as a gift which was very thoughtful. Location is great."
Great
53 reviews
9.2/10
1 night
From AU$26
Check Availability
99+
Hotels in Nagasaki Prefecture
New extended building just opened in April 2012. For weekday guests, we are offering cruising tour for free until October.

"The location of the hotel was far from the city but there was a resort feeling. The room was large and beautiful because I stayed at the new building. I was surprised because there was beer in the welcome drink ‼️ In addition, it was very satisfying that the alcoholic beverage at dinner was free to drink. The rice was delicious. It was good that there was an open-air bath, but it was a pity that the corner 々 was beautiful. It is a hotel that I wanted to go again."
Very Good
12 reviews
8.2/10
1 night
From AU$181
Check Availability
64
Hotels in Nagasaki Prefecture
With a stay at Route - Hostel in Nagasaki, you'll be just steps from Twenty-Six Martyrs Museum and Monument and Oka Masaharu Memorial Nagasaki Peace Museum. This hostel is 0.3 mi (0.4 km) from Amu Plaza Nagasaki and 0.4 mi (0.6 km) from Nakamachi Church. Take advantage of recreation opportunities such as bicycles to rent, or other amenities including complimentary wireless internet access and a communal living room. Satisfy your appetite at the hostel's coffee shop/cafe. Full breakfasts are available daily from 8:30 AM to 10 AM for a fee. Featured amenities include luggage storage, laundry facilities, and a safe deposit box at the front desk. Make yourself at home in one of the 6 air-conditioned guestrooms. Complimentary wireless internet access is available to keep you connected. Bathrooms have complimentary toiletries and hair dryers.

"The location is a bit uphill, but it's not too far, so it's suitable, and the owner is very kind. The only thing is that the bed is a little uncomfortable. It feels like two mattresses were combined into one, so I couldn't sleep well. The bathroom and shower aren't in a separate room, but are in the space next to the bed, so if you come in late and wash up, you'll be really self-conscious."
Great
57 reviews
9.3/10
1 night
From AU$31
Check Availability
99+
Hotels in Nagasaki Prefecture
With a stay at Hostel Casa Noda, you'll be centrally located in Nagasaki, a short 7-minute walk from Nagasaki Dejima and 10 minutes by foot from Twenty-Six Martyrs Museum and Monument. This hostel is 0.7 mi (1.1 km) from Megane Bridge and 1 mi (1.6 km) from Sofuku-ji. Take in the views from a rooftop terrace and make use of amenities such as complimentary wireless internet access. Featured amenities include express check-in, express check-out, and multilingual staff. Make yourself at home in one of the 5 air-conditioned rooms featuring microwaves. Prepare your meals in the shared/communal kitchen. Complimentary wireless internet access is available to keep you connected. Bathrooms have complimentary toiletries and bidets.

"This hostel has some genuinely strong points, but also several issues that stop it from being a great stay. It’s very much a mix of highs and lows. The positives: The common room is comfortable, with very good sofas and fast Wi-Fi (though it occasionally drops out — a router upgrade would easily fix this). There’s a shared kitchen with a labelled fridge, and the location is excellent for exploring Nagasaki. Dorm rooms are good value for the price. Bed spaces are a decent size, with excellent blackout curtains that block light even if others leave the lights on. You also get a small lockbox for valuables. The negatives: Check-in is fully self-service with no reception. You’re given a folder with rules and keys, but if you need help, there’s no clear support — which can be stressful, especially for travellers without phone SIMs. There is no lift. I stayed on the fourth floor, and the narrow stairs make carrying luggage difficult. Facilities per floor are also limited: only one toilet and one shower shared between multiple dorms, plus the washer and dryer on the same floor, which feels insufficient and awkward. Extras are all paid separately (towels, toothbrushes, earplugs, etc.). A towel really should be included at this price. Guests are also expected to strip their own bedsheets at checkout, which feels excessive. The common room layout could be improved. A large hammock takes up space and reduces seating — replacing it with chairs or bar seating would make the area far more usable. There were also staff or long-term workers frequently occupying the common room, which made the space feel less guest-focused. Air conditioning is locked and cannot be adjusted, so if you’re too hot or cold, you have no control. Would I stay again? As a backpacker on a very tight budget, yes — tahe location and price make it workable. But if you can afford it, I’d recommend paying more for a private room nearby. There are many hotels in the area offering much better comfort and support."
Very Good
49 reviews
8.9/10
1 night
From AU$23
Check Availability
23
Hotels in Nagasaki Prefecture
When you stay at Almas Guest House - Hostel in Nagasaki, you'll be in the historical district, just steps from Nagasaki Dejima and Dejima Museum. This hostel is 0.2 mi (0.4 km) from Hamanomachi Arcade and 0.4 mi (0.6 km) from Yume Saito Shopping Mall. Featured amenities include luggage storage, laundry facilities, and a safe deposit box at the front desk. Make yourself at home in one of the 2 guestrooms. Complimentary wireless internet access is available to keep you connected. Bathrooms feature showers with rainfall showerheads and complimentary toiletries. Conveniences include laptop-compatible safes and separate sitting areas, and housekeeping is provided daily.

"There are trams and buses nearby with frequent services, which is quite convenient. The hostel is on the fourth floor and there is no elevator. It is not recommended to bring large suitcases. The reception staff is very enthusiastic, just like returning to a relative's house. There are many people staying here, and there is only one bathroom, so you need to queue up. You can store your things for free, but there are no lockers or locks. Washing machines and dryers are available for a fee, and you can also go to the rooftop to dry clothes. (The following photos are screenshots of the video, please forgive me for the poor quality 🙏🏻)"
Very Good
19 reviews
8.5/10
1 night
From AU$31
Check Availability
53
Hotels in Nagasaki Prefecture
A wooden 3-story guest house with an atmosphere of long history, surrounded by the beautiful sea.

"The building was old but it was a very clean and atmosphere hotel. TV, toilet and shower are shared types. It is difficult to hear the voice of other rooms, there are restaurants around and it is lively at night. Overall satisfied."
Very Good
2 reviews
8.7/10
1 night
From AU$277
Check Availability
60
Hotels in Nagasaki Prefecture
Located in Tsushima, 1.3 miles from Miuda Beach, Midori Guesthouse&Hostel has accommodations with free WiFi and free private parking. This 1-star hostel has air-conditioned rooms with a private bathroom. Guests can enjoy mountain views. The rooms in the hostel are equipped with a flat-screen TV and a hairdryer. An American breakfast is available at Midori Guesthouse&Hostel. Activities such as fishing, snorkeling, cycling can be enjoyed in the surrounding areas, and guests can relax along the beachfront. Tsushima Airport is 41 miles from the property.

"Very close to Hitakatsu Port 5 minutes walk I also rented a bicycle and traveled comfortably by bike ~ !! The room was quite spacious and cleaner than I thought, so I stayed comfortably. The bed was spacious and fluffy, so I slept well. There were many restaurants near the hostel and it was so nice in the morning because it was a view of the sea The boss was so kind and checked out and left my luggage for free. I was comfortable traveling on the last day I will book again next time I go ** !!"
Very Good
11 reviews
8.9/10
1 night
From AU$60
Check Availability
See All Hostels in Nagasaki Prefecture

Travelers Reviews of Nagasaki Prefecture Hotels

See all

Hostel Casa Noda

8.9/10
Very Good
Posted on Jan 18, 2026
Dr.p3pp3r
This hostel has some genuinely strong points, but also several issues that stop it from being a great stay. It’s very much a mix of highs and lows. The positives: The common room is comfortable, with very good sofas and fast Wi-Fi (though it occasionally drops out — a router upgrade would easily fix this). There’s a shared kitchen with a labelled fridge, and the location is excellent for exploring Nagasaki. Dorm rooms are good value for the price. Bed spaces are a decent size, with excellent blackout curtains that block light even if others leave the lights on. You also get a small lockbox for valuables. The negatives: Check-in is fully self-service with no reception. You’re given a folder with rules and keys, but if you need help, there’s no clear support — which can be stressful, especially for travellers without phone SIMs. There is no lift. I stayed on the fourth floor, and the narrow stairs make carrying luggage difficult. Facilities per floor are also limited: only one toilet and one shower shared between multiple dorms, plus the washer and dryer on the same floor, which feels insufficient and awkward. Extras are all paid separately (towels, toothbrushes, earplugs, etc.). A towel really should be included at this price. Guests are also expected to strip their own bedsheets at checkout, which feels excessive. The common room layout could be improved. A large hammock takes up space and reduces seating — replacing it with chairs or bar seating would make the area far more usable. There were also staff or long-term workers frequently occupying the common room, which made the space feel less guest-focused. Air conditioning is locked and cannot be adjusted, so if you’re too hot or cold, you have no control. Would I stay again? As a backpacker on a very tight budget, yes — tahe location and price make it workable. But if you can afford it, I’d recommend paying more for a private room nearby. There are many hotels in the area offering much better comfort and support.
Price per night from:AU$23

Casa Blanca Guesthouse

9.2/10
Great
Posted on Feb 22, 2026
Guest User
The hostel is nice with a nice layout that gives you some privacy. However since every bed has its own light people just kept it on the whole night so I couldn’t sleep. Also the dormitory is small and showers and toilets are inside the room and people started to use the hairdryer early in the morning. The owners are nice tho, and when I complaint they gave me an eye mask as a gift which was very thoughtful. Location is great.
Price per night from:AU$26

Capsule Hotel Nagasaki

7.7/10
Good
Posted on Mar 19, 2025
AKrSarkar
Stayed in the capsule hotel near Bus station. It's on the 2nd floor and accessible only via an elevator. By looking at it felt like it was a new establishment. I'd recommend it for anyone who wants to avoid hostels.
Price per night from:AU$32

Route - Cafe and Petit Hostel

9.3/10
Great
Posted on Jan 16, 2025
Guest User
The location is a bit uphill, but it's not too far, so it's suitable, and the owner is very kind. The only thing is that the bed is a little uncomfortable. It feels like two mattresses were combined into one, so I couldn't sleep well. The bathroom and shower aren't in a separate room, but are in the space next to the bed, so if you come in late and wash up, you'll be really self-conscious.
Price per night from:AU$31

Hotel 21

5.4/10
Posted on Oct 8, 2025|Standard 2-bed Room
JPs2huna
I booked this hotel for a trip to watch a basketball game! The location was great and the manager was incredibly kind. It was incredibly comfortable, and if I have the chance to go to Nagasaki again, I'd love to stay here again! It seems like it used to be a love hotel, so I chose a room lit up in green. lol (They showed me three rooms and let me choose the one I liked best. 🥲) The room was spacious, so I had a great time staying there with my friends, and the bed was so comfortable I didn't want to move. lol
Price per night from:AU$47

Almas Guest House

8.5/10
Very Good
Posted on Apr 11, 2025
JP舒SHU
There are trams and buses nearby with frequent services, which is quite convenient. The hostel is on the fourth floor and there is no elevator. It is not recommended to bring large suitcases. The reception staff is very enthusiastic, just like returning to a relative's house. There are many people staying here, and there is only one bathroom, so you need to queue up. You can store your things for free, but there are no lockers or locks. Washing machines and dryers are available for a fee, and you can also go to the rooftop to dry clothes. (The following photos are screenshots of the video, please forgive me for the poor quality 🙏🏻)
Price per night from:AU$31

Minato Capsule Inn

9.1/10
Great
Posted on Nov 17, 2025
S.Shinji
25年に入ってから2回利用しました。 名前の通り、長崎港ターミナルからは至近で、五島列島など周辺離島への拠点にも良く、長崎駅からもそこまで離れていません。中華街や出島、長崎県美術館などの観光地へのアクセスも優良。 大浴場も、しっかり広くて、快適。価格を考えると、このクオリティのお風呂に、何回でも入れるのは、非常に優秀だと思う。 カプセルは若干の古さはあり、場合によっては近隣の人のいびきなどが聞こえることもありますが、概ね快適。ロッカーはかなり縦長で狭いので、大荷物の場合はフロントに預けたりが必要かもしれません。 長崎訪問の際には、また利用させていただきたいと思います。
Price per night from:AU$31

IKI RETREAT KAIRI MURAKAMI by Onko Chishin

/10
Posted on Apr 27, 2024
Anonymous User
Overall very satisfied, the environment is very good, the food is also very good. There will be a special car to pick you up at the pier, you can make an appoin**ent for a private hot spring, and there is also a gym. Overall very satisfied
Price per night from:AU$487

Juraku

8.9/10
Very Good
Posted on Aug 17, 2025
SUNGWOO
This is a great hotel. It's located high up in the hills, offering a beautiful view. The facilities are well-equipped, making for a comfortable stay. The staff also speak Korean, which was a plus.
Price per night from:AU$58

Midori Guesthouse&Hostel

8.9/10
Very Good
Posted on Oct 26, 2024
헤이모두들안녕
Very close to Hitakatsu Port 5 minutes walk I also rented a bicycle and traveled comfortably by bike ~ !! The room was quite spacious and cleaner than I thought, so I stayed comfortably. The bed was spacious and fluffy, so I slept well. There were many restaurants near the hostel and it was so nice in the morning because it was a view of the sea The boss was so kind and checked out and left my luggage for free. I was comfortable traveling on the last day I will book again next time I go ** !!
Price per night from:AU$60

Frequently Asked Questions

How do I book a hotel on Trip.com?

To book a hotel on Trip.com, simply enter your destination, travel dates, and the number of guests on the page. Then, browse through the available hotels and select the one you want to book. Follow the prompts to enter your payment information and complete the booking.

How do I get hotel deals on Trip.com?

There are several ways to find affordable hotels on Trip.com. You can narrow down your search results by filtering hotels according to your preferred price range, or you can sort the results by price to view the cheapest options first.

Where can I find hotel deals on Trip.com?

Trip.com offers a wide variety of hotel deals and promotions that are available throughout the year. You can easily find these special offers on our deals page. What's more, if you are a member of our loyalty program, you can sign in to your account and discover exclusive discounted rates at hotel list pages.

How can I get lower prices for hotels?

Sometimes booking hotels midweek is cheaper, but it also depends on the season.

How many hotels are listed on Trip.com?

You can find over 1.5 million hotels in more than 230 countries or regions on Trip.com. Haven't decided which hotel to book? Browse our site to get ideas!

Can I cancel or change my hotel bookings on Trip.com?

It depends on the hotel policy and date of cancellation. Please check the policy section of the related hotel pages. To cancel or change your bookings, sign in to your Trip.com account, go to "My Bookings", and follow the instructions.

How do I contact Trip.com customer support?

You can contact Trip.com's 24/7 customer support by visiting the Help Center on Trip.com and submitting a request. You can also contact us by phone or service chat, depending on your location.

Property Information for Tourists

Total properties7
Number of reviews298
Weekday Avg. PriceAU$246
Weekend Avg. PriceAU$266